Diachasma alloeum adult male wasp RNAseq library - SRA

SRX1038781: Diachasma alloeum adult male wasp RNAseq library
1 ILLUMINA (Illumina HiSeq 2500) run: 24.5M spots, 4.9G bases, 2.1Gb downloads

Design: The RNAseq libraries were prepared from pooled adult male wasps with the TruSeq Stranded RNAseq Sample Prep Kit (Illumina). The libraries were quantitated by qPCR and sequenced on one lane for 101 cycles from each end of the fragments on a HiSeq2500 using a TruSeq SBS sequencing kit version 4. Fastq files were generated and demultiplexed with the software Casava 1.8.2 (Illumina).

Submitted by: (UIUC)

Study: Diachasma alloeum Transcriptome or Gene expression

PRJNA283787 • SRP058726 • All experiments • All runs

show Abstracthide Abstract

Transcript information for Diachasma alloeum will support genome annotation efforts.

Sample: Wild Rhagoletis pomonella larvae infesting the fruits of hawthorn were collected and allowed to pupate at room temperature. The Rhagoletis pupae were overwintered in the lab for 4 months at 4 degrees and then placed in a cage to monitor adult Diachasma alloeum emergence.

SAMN03656148 • SRS945568 • All experiments • All runs

Organism: Diachasma alloeum

Library:

Name: Diachasma_alloeum_adult_male_wasp

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PolyA

Layout: PAIRED

Spot descriptor:

1 forward101 reverse

Pipeline: show...hide...

Program	Version
Casava	1.8.2

Runs: 1 run, 24.5M spots, 4.9G bases, 2.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR2040481	24,511,156	4.9G	2.1Gb	2015-11-05

ID:: 1506041

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity